STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS1789Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
NBR_LOCUS589
KOW domain-containing protein.
   
   0.839
NBR_LOCUS13180
60S ribosomal protein L27a (inferred by orthology to a human protein); Belongs to the universal ribosomal protein uL15 family.
   
 
 0.733
NBR_LOCUS15345
28S ribosomal protein S33, mitochondrial (inferred by orthology to a human protein).
   
   0.730
NBR_LOCUS5810
Probable 39S ribosomal protein L23, mitochondrial (inferred by orthology to a C. elegans protein).
   
    0.728
NBR_LOCUS9009
39S ribosomal protein L13, mitochondrial (inferred by orthology to a human protein).
   
   0.674
NBR_LOCUS7751
Probable 28S ribosomal protein S16, mitochondrial (inferred by orthology to a C. elegans protein).
   
   0.672
NBR_LOCUS433
39S ribosomal protein L21, mitochondrial (inferred by orthology to a human protein).
   
   0.667
NBR_LOCUS17135
ZnF_CDGSH domain-containing protein.
   
  
 0.659
NBR_LOCUS19598
39S ribosomal protein L15, mitochondrial (inferred by orthology to a human protein).
   
 
 0.658
NBR_LOCUS19599
Uncharacterized protein.
   
 
 0.658
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.