STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS2158ADP-ribosylation factor-like protein 5 (inferred by orthology to a C. elegans protein). (162 aa)    
Predicted Functional Partners:
NBR_LOCUS19357
DH domain-containing protein.
    
 0.996
NBR_LOCUS17540
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.944
NBR_LOCUS18452
AP-1 complex subunit gamma-1 (inferred by orthology to a human protein).
    
 0.941
NBR_LOCUS13038
Uncharacterized protein.
    
 0.938
NBR_LOCUS12533
SEC7 domain-containing protein.
    
 0.902
NBR_LOCUS20609
Uncharacterized protein.
   
 0.850
NBR_LOCUS21862
Uncharacterized protein.
   
 0.850
NBR_LOCUS15597
Uncharacterized protein.
   
 0.850
NBR_LOCUS392
SAM domain-containing protein.
   
 0.850
NBR_LOCUS8665
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.842
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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