Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NBR_LOCUS10956 | NBR_LOCUS1411 | A0A0N4Y4U9 | A0A0N4XFV8 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Adenosylhomocysteinase. | 0.975 |
NBR_LOCUS10956 | NBR_LOCUS2338 | A0A0N4Y4U9 | A0A0N4XII5 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Protein-S-isoprenylcysteine O-methyltransferase. | 0.753 |
NBR_LOCUS10956 | NBR_LOCUS7371 | A0A0N4Y4U9 | A0A0N4XWS3 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Hcy-binding domain-containing protein. | 0.931 |
NBR_LOCUS10956 | NBR_LOCUS7977 | A0A0N4Y4U9 | A0A0N4XY45 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Flavokinase domain-containing protein. | 0.703 |
NBR_LOCUS13420 | NBR_LOCUS17399 | A0A158R1A8 | A0A0N4YK57 | Uncharacterized protein. | CAAX prenyl protease 2 (inferred by orthology to a human protein). | 0.970 |
NBR_LOCUS13420 | NBR_LOCUS2338 | A0A158R1A8 | A0A0N4XII5 | Uncharacterized protein. | Protein-S-isoprenylcysteine O-methyltransferase. | 0.915 |
NBR_LOCUS13479 | NBR_LOCUS17399 | A0A158R1B9 | A0A0N4YK57 | Ras protein let-60 (inferred by orthology to a C. elegans protein). | CAAX prenyl protease 2 (inferred by orthology to a human protein). | 0.787 |
NBR_LOCUS13479 | NBR_LOCUS2338 | A0A158R1B9 | A0A0N4XII5 | Ras protein let-60 (inferred by orthology to a C. elegans protein). | Protein-S-isoprenylcysteine O-methyltransferase. | 0.747 |
NBR_LOCUS1411 | NBR_LOCUS10956 | A0A0N4XFV8 | A0A0N4Y4U9 | Adenosylhomocysteinase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.975 |
NBR_LOCUS1411 | NBR_LOCUS2338 | A0A0N4XFV8 | A0A0N4XII5 | Adenosylhomocysteinase. | Protein-S-isoprenylcysteine O-methyltransferase. | 0.824 |
NBR_LOCUS1411 | NBR_LOCUS7371 | A0A0N4XFV8 | A0A0N4XWS3 | Adenosylhomocysteinase. | Hcy-binding domain-containing protein. | 0.974 |
NBR_LOCUS14292 | NBR_LOCUS17399 | A0A0N4YCL7 | A0A0N4YK57 | Uncharacterized protein. | CAAX prenyl protease 2 (inferred by orthology to a human protein). | 0.787 |
NBR_LOCUS14292 | NBR_LOCUS2338 | A0A0N4YCL7 | A0A0N4XII5 | Uncharacterized protein. | Protein-S-isoprenylcysteine O-methyltransferase. | 0.747 |
NBR_LOCUS15494 | NBR_LOCUS17399 | A0A158R2B8 | A0A0N4YK57 | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | CAAX prenyl protease 2 (inferred by orthology to a human protein). | 0.970 |
NBR_LOCUS15494 | NBR_LOCUS2338 | A0A158R2B8 | A0A0N4XII5 | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | Protein-S-isoprenylcysteine O-methyltransferase. | 0.915 |
NBR_LOCUS17399 | NBR_LOCUS13420 | A0A0N4YK57 | A0A158R1A8 | CAAX prenyl protease 2 (inferred by orthology to a human protein). | Uncharacterized protein. | 0.970 |
NBR_LOCUS17399 | NBR_LOCUS13479 | A0A0N4YK57 | A0A158R1B9 | CAAX prenyl protease 2 (inferred by orthology to a human protein). | Ras protein let-60 (inferred by orthology to a C. elegans protein). | 0.787 |
NBR_LOCUS17399 | NBR_LOCUS14292 | A0A0N4YK57 | A0A0N4YCL7 | CAAX prenyl protease 2 (inferred by orthology to a human protein). | Uncharacterized protein. | 0.787 |
NBR_LOCUS17399 | NBR_LOCUS15494 | A0A0N4YK57 | A0A158R2B8 | CAAX prenyl protease 2 (inferred by orthology to a human protein). | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | 0.970 |
NBR_LOCUS17399 | NBR_LOCUS2338 | A0A0N4YK57 | A0A0N4XII5 | CAAX prenyl protease 2 (inferred by orthology to a human protein). | Protein-S-isoprenylcysteine O-methyltransferase. | 0.923 |
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