STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS2531Uncharacterized protein. (180 aa)    
Predicted Functional Partners:
KATNA1
Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
   
 
 0.966
NBR_LOCUS756
Katanin_con80 domain-containing protein.
 
      0.622
NBR_LOCUS7045
Uncharacterized protein.
   
 
 0.560
NBR_LOCUS13650
26S protease regulatory subunit 8 (inferred by orthology to a human protein); Belongs to the AAA ATPase family.
   
 
 0.533
NBR_LOCUS12483
Patronin (inferred by orthology to a D. melanogaster protein).
    
 
 0.521
NBR_LOCUS95
Probable glycerol kinase (inferred by orthology to a C. elegans protein).
    
 
 0.516
NBR_LOCUS1992
Uncharacterized protein.
    
 
 0.516
NBR_LOCUS3591
26S protease regulatory subunit 7 (inferred by orthology to a C. elegans protein).
    
 
 0.516
NBR_LOCUS4352
26S protease regulatory subunit 7 (inferred by orthology to a C. elegans protein).
    
 
 0.516
NBR_LOCUS4427
26S protease regulatory subunit 7 (inferred by orthology to a C. elegans protein).
    
 
 0.516
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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