STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS2641LDLRAD3 protein (inferred by orthology to a human protein). (227 aa)    
Predicted Functional Partners:
NBR_LOCUS2149
LpR2 (inferred by orthology to a D. melanogaster protein).
 
     0.928
NBR_LOCUS3488
Uncharacterized protein.
 
     0.924
NBR_LOCUS3471
LDLRAD3 protein (inferred by orthology to a human protein).
 
     0.918
NBR_LOCUS22119
LpR2 (inferred by orthology to a D. melanogaster protein).
 
     0.911
NBR_LOCUS3747
Low-density lipoprotein receptor-related protein (inferred by orthology to a C. elegans protein).
 
     0.895
NBR_LOCUS2865
Low-density lipoprotein receptor-related protein (inferred by orthology to a C. elegans protein).
 
     0.892
NBR_LOCUS3699
Uncharacterized protein.
 
      0.891
NBR_LOCUS4441
Low-density lipoprotein receptor-related protein (inferred by orthology to a C. elegans protein).
 
     0.875
NBR_LOCUS4990
Sortilin-related receptor (inferred by orthology to a human protein).
 
     0.860
NBR_LOCUS4628
Sortilin-related receptor (inferred by orthology to a human protein).
 
      0.851
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.