STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS3128Uncharacterized protein. (265 aa)    
Predicted Functional Partners:
NBR_LOCUS5928
Uncharacterized protein.
 
 
  0.928
NBR_LOCUS17349
FERM domain-containing protein.
 
  
 
 0.913
NBR_LOCUS20146
Putative 4.1 G protein (inferred by orthology to a S. mansoni protein).
 
  
 
 0.913
NBR_LOCUS833
FERM domain-containing protein.
 
      0.899
NBR_LOCUS5925
Fibronectin type-III domain-containing protein.
 
 
  0.788
NBR_LOCUS208
Tyrosine-protein kinase Src42A (inferred by orthology to a D. melanogaster protein).
   
 0.780
NBR_LOCUS6057
Tyrosine-protein kinase.
   
 0.780
NBR_LOCUS16085
Sex muscle abnormal protein 5 (inferred by orthology to a C. elegans protein).
   
 0.762
NBR_LOCUS5547
Uncharacterized protein.
    
 0.743
NBR_LOCUS13136
Receptor tyrosine-protein kinase let-23 (inferred by orthology to a C. elegans protein).
    
 0.743
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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