STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS3291Intraflagellar transport protein 74 homolog (inferred by orthology to a human protein). (228 aa)    
Predicted Functional Partners:
NBR_LOCUS7143
IFT81_CH domain-containing protein.
  
 0.995
NBR_LOCUS9420
Osm-6 protein (inferred by orthology to a C. elegans protein).
    
 0.989
NBR_LOCUS9858
Uncharacterized protein.
    
 0.973
NBR_LOCUS9274
Intraflagellar transport protein che-13 (inferred by orthology to a C. elegans protein).
    
 0.972
NBR_LOCUS22434
Uncharacterized protein.
   
 0.971
NBR_LOCUS15975
Uncharacterized protein.
   
 0.971
NBR_LOCUS16507
Ubiquitin fusion degradation protein 1 homolog (inferred by orthology to a C. elegans protein).
    
 0.952
NBR_LOCUS5662
Intraflagellar transport protein variant c (inferred by orthology to a C. elegans protein).
    
 0.938
NBR_LOCUS5663
Intraflagellar transport protein variant c (inferred by orthology to a C. elegans protein).
    
 0.938
NBR_LOCUS10052
Nuclear protein localization protein 4 homolog (inferred by orthology to a human protein).
    
  0.938
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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