STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS3345Uncharacterized protein; Belongs to the peptidase S10 family. (97 aa)    
Predicted Functional Partners:
NBR_LOCUS19935
Beta-galactosidase.
   
 0.659
NBR_LOCUS523
Beta-galactosidase.
   
 0.659
NBR_LOCUS7699
Glyco_hydro_35 domain-containing protein.
   
 0.656
NBR_LOCUS7530
Uncharacterized protein; Belongs to the peptidase C1 family.
   
 0.520
NBR_LOCUS14289
Phosphatidylethanolamine-binding protein homolog (inferred by orthology to a C. elegans protein).
   
 
 0.513
NBR_LOCUS590
Endoplasmic reticulum lectin 1 (inferred by orthology to a human protein).
   
 
 0.463
NBR_LOCUS5188
Uncharacterized protein.
   
 
 0.463
NBR_LOCUS16751
E3 ubiquitin-protein ligase hrd-1 (inferred by orthology to a C. elegans protein).
    
 
 0.437
NBR_LOCUS17150
E3 ubiquitin-protein ligase hrd-like protein 1 (inferred by orthology to a C. elegans protein).
    
 
 0.437
NBR_LOCUS8408
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.423
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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