STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS4122Fibronectin type-III domain-containing protein. (156 aa)    
Predicted Functional Partners:
NBR_LOCUS6366
Uncharacterized protein.
   
 0.758
NBR_LOCUS7055
Nephrin (inferred by orthology to a human protein).
   
 0.695
NBR_LOCUS19357
DH domain-containing protein.
     
 0.687
NBR_LOCUS18588
Adenosine kinase (inferred by orthology to a human protein).
    
 0.677
NBR_LOCUS6925
Nephrin (inferred by orthology to a human protein).
   
 0.674
NBR_LOCUS6926
Nephrin (inferred by orthology to a human protein).
   
 0.674
NBR_LOCUS10829
Uncharacterized protein.
    
 0.664
NBR_LOCUS10830
Uncharacterized protein.
    
 0.664
NBR_LOCUS1476
Tyrosine-protein phosphatase non-receptor type (inferred by orthology to a C. elegans protein).
    
  0.654
NBR_LOCUS21405
SH2 domain-containing protein.
    
  0.654
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.