STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS4771Uncharacterized protein. (169 aa)    
Predicted Functional Partners:
NBR_LOCUS12491
WD-repeat protein, putative (inferred by orthology to a S. mansoni protein).
    
 
 0.957
NBR_LOCUS20024
Pre-mRNA-splicing factor syf-2 (inferred by orthology to a C. elegans protein).
    
  0.949
NBR_LOCUS75
WD_REPEATS_REGION domain-containing protein.
    
 
 0.937
NBR_LOCUS5940
Pre-mRNA-processing factor 19 homolog (inferred by orthology to a C. elegans protein).
    
 
 0.910
NBR_LOCUS3066
Uncharacterized protein.
    
  0.874
NBR_LOCUS662
Uncharacterized protein.
    
 0.851
NBR_LOCUS20360
Uncharacterized protein.
    
 0.851
NBR_LOCUS12113
Serine/arginine repetitive matrix protein 1 (inferred by orthology to a human protein).
     
 0.840
NBR_LOCUS8954
mRNA transport homolog 4 (inferred by orthology to a C. elegans protein).
   
 0.838
NBR_LOCUS13469
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.829
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.