STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS5252EFTUD2 domain-containing protein. (71 aa)    
Predicted Functional Partners:
NBR_LOCUS18797
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.991
NBR_LOCUS8972
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.990
NBR_LOCUS960
40S ribosomal protein S18 (inferred by orthology to a human protein).
  
 0.989
NBR_LOCUS7769
40S ribosomal protein S15 (inferred by orthology to a C. elegans protein); Belongs to the universal ribosomal protein uS19 family.
  
 0.989
NBR_LOCUS9480
40S ribosomal protein S3 (inferred by orthology to a C. elegans protein); Belongs to the universal ribosomal protein uS3 family.
  
 0.989
NBR_LOCUS10635
60S ribosomal protein L23 (inferred by orthology to a C. elegans protein); Belongs to the universal ribosomal protein uL14 family.
  
 0.989
NBR_LOCUS10917
Probable 40S ribosomal protein S14, mitochondrial (inferred by orthology to a C. elegans protein).
  
 0.989
NBR_LOCUS11772
60S ribosomal protein L23a (inferred by orthology to a human protein).
  
 0.989
NBR_LOCUS11904
U5 small nuclear ribonucleoprotein 40 kDa protein (inferred by orthology to a human protein).
   
 0.989
NBR_LOCUS12091
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.989
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.