STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS6719Valine--tRNA ligase (inferred by orthology to a C. elegans protein); Belongs to the class-I aminoacyl-tRNA synthetase family. (1053 aa)    
Predicted Functional Partners:
NBR_LOCUS11388
Probable elongation factor 1-gamma (inferred by orthology to a C. elegans protein).
   
 0.996
NBR_LOCUS15666
Aspartate--tRNA ligase, mitochondrial (inferred by orthology to a human protein).
  
  
 0.914
NBR_LOCUS9082
Methionine--tRNA ligase, cytoplasmic (inferred by orthology to a C. elegans protein); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.895
NBR_LOCUS836
Probable leucine--tRNA ligase, mitochondrial (inferred by orthology to a human protein); Belongs to the class-I aminoacyl-tRNA synthetase family.
   
0.894
NBR_LOCUS1278
Isoleucine--tRNA ligase, cytoplasmic (inferred by orthology to a human protein); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.893
NBR_LOCUS20231
Isoleucine--tRNA ligase, cytoplasmic (inferred by orthology to a C. elegans protein).
  
 0.893
NBR_LOCUS747
Leucine--tRNA ligase (inferred by orthology to a C. elegans protein); Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.888
NBR_LOCUS3455
tRNA-synt_1 domain-containing protein.
   
 0.888
NBR_LOCUS5536
Leucine--tRNA ligase (inferred by orthology to a C. elegans protein).
   
 0.888
NBR_LOCUS18728
Uncharacterized protein.
   
 0.888
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.