STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS7052Uncharacterized protein. (461 aa)    
Predicted Functional Partners:
NBR_LOCUS66
Phospholipase B1, membrane-associated (inferred by orthology to a human protein).
     
 0.930
NBR_LOCUS16242
Pantothenate kinase 4 (inferred by orthology to a human protein).
     
 0.862
NBR_LOCUS6809
85/88 kDa calcium-independent phospholipase A2 (inferred by orthology to a human protein).
     
 0.829
NBR_LOCUS7748
Phospholipase A2 (inferred by orthology to a human protein).
     
 0.826
NBR_LOCUS1813
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.749
NBR_LOCUS12311
Phosphodiesterase.
     
 0.746
NBR_LOCUS9760
Uncharacterized protein.
  
 
 0.720
NBR_LOCUS8192
Nucleoside-diphosphatase uda-1 (inferred by orthology to a C. elegans protein); Belongs to the GDA1/CD39 NTPase family.
   
 0.718
NBR_LOCUS20503
NADH pyrophosphatase (inferred by orthology to a C. elegans protein).
    
 0.692
NBR_LOCUS6082
Glycogen debranching enzyme (inferred by orthology to a human protein).
     
 0.684
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.