STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS7058DNA polymerase (inferred by orthology to a C. elegans protein). (78 aa)    
Predicted Functional Partners:
NBR_LOCUS15981
DNA repair protein REV1 (inferred by orthology to a human protein).
   
 0.990
NBR_LOCUS16531
DNA primase large subunit (inferred by orthology to a C. elegans protein).
   
 0.989
NBR_LOCUS10316
Probable DNA polymerase epsilon subunit 2 (inferred by orthology to a C. elegans protein).
   
 0.988
NBR_LOCUS14252
DNA polymerase eta (inferred by orthology to a human protein).
   
 0.987
NBR_LOCUS2383
Uncharacterized protein.
   
 0.970
NBR_LOCUS2816
Uncharacterized protein.
   
 0.970
NBR_LOCUS3282
Uncharacterized protein.
   
 0.970
NBR_LOCUS8390
DNA helicase; Belongs to the MCM family.
   
 0.962
NBR_LOCUS18052
Cell division control protein 45 homolog (inferred by orthology to a human protein).
   
 0.958
NBR_LOCUS11389
WD repeat and HMG-box DNA-binding protein 1 (inferred by orthology to a human protein).
   
 
 0.954
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
Server load: low (24%) [HD]