STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS7153Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
NBR_LOCUS12630
Uncharacterized protein.
    
 0.819
NBR_LOCUS755
EGL-30 (inferred by orthology to a C. elegans protein).
    
 0.790
NBR_LOCUS17027
G protein gamma domain-containing protein.
    
  0.710
NBR_LOCUS11442
Guanine nucleotide-binding protein subunit beta-2 (inferred by orthology to a C. elegans protein).
    
 0.707
NBR_LOCUS17006
Guanine nucleotide-binding protein subunit beta-1 (inferred by orthology to a C. elegans protein).
    
 0.707
NBR_LOCUS9095
Cholecystokinin receptor 2 (inferred by orthology to a C. elegans protein); Belongs to the G-protein coupled receptor 1 family.
    
 0.668
NBR_LOCUS14630
Probable muscarinic acetylcholine receptor gar-2 (inferred by orthology to a C. elegans protein); Belongs to the G-protein coupled receptor 1 family.
   
  0.640
NBR_LOCUS11760
Thyrotropin-releasing hormone receptor (inferred by orthology to a human protein); Belongs to the G-protein coupled receptor 1 family.
   
 0.636
NBR_LOCUS8628
Probable beta-arrestin (inferred by orthology to a C. elegans protein).
     
 0.622
NBR_LOCUS14714
Apple domain-containing protein.
    
 0.597
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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