STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS7292Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
NBR_LOCUS5798
Uncharacterized protein.
   
    0.999
NBR_LOCUS15806
Warthog protein 1 (inferred by orthology to a C. elegans protein).
   
    0.999
NBR_LOCUS18046
Uncharacterized protein.
   
    0.999
NBR_LOCUS12111
Uncharacterized protein.
   
    0.947
NBR_LOCUS14985
Uncharacterized protein.
   
    0.947
NBR_LOCUS7053
Uncharacterized protein.
   
    0.823
NBR_LOCUS6362
Cuticle collagen dpy-7 (inferred by orthology to a C. elegans protein).
   
    0.815
NBR_LOCUS11855
Ground-like domain-containing protein.
   
    0.815
NBR_LOCUS12824
Amino_oxidase domain-containing protein.
   
    0.815
NBR_LOCUS10293
Uncharacterized protein.
   
    0.704
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.