STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS7496Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
NBR_LOCUS7130
Mitogen-activated protein kinase kinase kinase 8 (inferred by orthology to a human protein).
    
 0.653
NBR_LOCUS15199
EFhand_Ca_insen domain-containing protein.
   
 0.431
NBR_LOCUS18633
Uncharacterized protein.
   
 0.431
NBR_LOCUS17265
Uncharacterized protein.
   
 0.431
NBR_LOCUS3450
Ras-related protein Rab-13 (inferred by orthology to a human protein).
   
  0.408
NBR_LOCUS6699
Uncharacterized protein.
   
  0.408
NBR_LOCUS21314
Ras-related protein Rab-10 (inferred by orthology to a human protein).
   
  0.408
NBR_LOCUS18096
Uncharacterized protein.
   
 0.407
NBR_LOCUS5923
Putative rab15, 13, 10, 1, 35, 5, and (inferred by orthology to a S. mansoni protein).
   
  0.404
NBR_LOCUS8080
DB domain-containing protein.
   
  0.404
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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