STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS8203FPL domain-containing protein. (283 aa)    
Predicted Functional Partners:
NBR_LOCUS17962
Uncharacterized protein.
 
     0.920
NBR_LOCUS2748
Uncharacterized protein.
 
      0.888
NBR_LOCUS17963
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
 
      0.878
NBR_LOCUS14590
Uncharacterized protein.
 
      0.797
NBR_LOCUS15162
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
 
      0.737
NBR_LOCUS16836
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
 
      0.723
NBR_LOCUS16745
Vacuolar protein sorting-associated protein 33B (inferred by orthology to a human protein); Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.430
NBR_LOCUS17551
Uncharacterized protein.
      
 0.408
NBR_LOCUS11579
Uncharacterized protein.
      
 0.408
NBR_LOCUS9887
Intron-binding protein aquarius (inferred by orthology to a human protein).
      
 0.406
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.