STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS8483Protein FRA10AC1 (inferred by orthology to a human protein). (51 aa)    
Predicted Functional Partners:
NBR_LOCUS19506
PPIase cyclophilin-type domain-containing protein.
   
   0.681
NBR_LOCUS15635
ES2 similar protein 2 (inferred by orthology to a C. elegans protein).
    
 
 0.630
NBR_LOCUS6502
Eph LBD domain-containing protein.
    
  0.597
NBR_LOCUS8886
Uncharacterized protein.
    
  0.597
NBR_LOCUS6501
Uncharacterized protein.
    
  0.564
NBR_LOCUS15120
Uncharacterized protein.
    
  0.564
NBR_LOCUS2240
Protein kinase domain-containing protein.
    
  0.491
NBR_LOCUS5354
Uncharacterized protein.
    
  0.491
NBR_LOCUS11038
Tyrosine kinase (inferred by orthology to a S. mansoni protein).
    
  0.491
NBR_LOCUS11040
Muscle, skeletal receptor tyrosine-protein kinase (inferred by orthology to a human protein).
    
  0.491
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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