Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FEN1 | NBR_LOCUS12517 | A0A0N4Y9Y7 | A0A0N4Y8G8 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein). | 0.914 |
| FEN1 | NBR_LOCUS15205 | A0A0N4Y9Y7 | A0A158R283 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein); Belongs to the RecA family. | 0.914 |
| FEN1 | NBR_LOCUS20741 | A0A0N4Y9Y7 | A0A0N4YU18 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein). | 0.914 |
| FEN1 | NBR_LOCUS22194 | A0A0N4Y9Y7 | A0A0N4YY69 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.914 |
| FEN1 | NBR_LOCUS4120 | A0A0N4Y9Y7 | A0A0N4XNL8 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.978 |
| FEN1 | NBR_LOCUS4224 | A0A0N4Y9Y7 | A0A0N4XNW9 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.773 |
| FEN1 | NBR_LOCUS5316 | A0A0N4Y9Y7 | A0A0N4XS12 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein). | 0.914 |
| FEN1 | NBR_LOCUS8527 | A0A0N4Y9Y7 | A0A0N4XZD1 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.801 |
| NBR_LOCUS11704 | NBR_LOCUS12668 | A0A158R0E8 | A0A0N4Y8T9 | ARID domain-containing protein. | RuvB-like helicase; Belongs to the RuvB family. | 0.815 |
| NBR_LOCUS11704 | NBR_LOCUS22194 | A0A158R0E8 | A0A0N4YY69 | ARID domain-containing protein. | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.469 |
| NBR_LOCUS11704 | NBR_LOCUS4224 | A0A158R0E8 | A0A0N4XNW9 | ARID domain-containing protein. | Uncharacterized protein. | 0.791 |
| NBR_LOCUS11704 | NBR_LOCUS8527 | A0A158R0E8 | A0A0N4XZD1 | ARID domain-containing protein. | Uncharacterized protein. | 0.788 |
| NBR_LOCUS12517 | FEN1 | A0A0N4Y8G8 | A0A0N4Y9Y7 | DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein). | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.914 |
| NBR_LOCUS12517 | NBR_LOCUS22194 | A0A0N4Y8G8 | A0A0N4YY69 | DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein). | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.989 |
| NBR_LOCUS12517 | NBR_LOCUS4120 | A0A0N4Y8G8 | A0A0N4XNL8 | DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein). | Uncharacterized protein. | 0.975 |
| NBR_LOCUS12517 | NBR_LOCUS4224 | A0A0N4Y8G8 | A0A0N4XNW9 | DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein). | Uncharacterized protein. | 0.579 |
| NBR_LOCUS12517 | NBR_LOCUS8527 | A0A0N4Y8G8 | A0A0N4XZD1 | DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein). | Uncharacterized protein. | 0.788 |
| NBR_LOCUS12668 | NBR_LOCUS11704 | A0A0N4Y8T9 | A0A158R0E8 | RuvB-like helicase; Belongs to the RuvB family. | ARID domain-containing protein. | 0.815 |
| NBR_LOCUS12668 | NBR_LOCUS22194 | A0A0N4Y8T9 | A0A0N4YY69 | RuvB-like helicase; Belongs to the RuvB family. | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.608 |
| NBR_LOCUS12668 | NBR_LOCUS4224 | A0A0N4Y8T9 | A0A0N4XNW9 | RuvB-like helicase; Belongs to the RuvB family. | Uncharacterized protein. | 0.990 |
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