STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS8607Snurportin-1 (inferred by orthology to a human protein). (188 aa)    
Predicted Functional Partners:
NBR_LOCUS8185
Importin subunit beta-1 (inferred by orthology to a human protein).
    
 0.980
NBR_LOCUS8186
Importin subunit beta-1 (inferred by orthology to a human protein).
    
 0.980
NBR_LOCUS12260
Nuclear pore complex protein Nup214 (inferred by orthology to a human protein).
    
 0.980
NBR_LOCUS6223
Exportin-1 (inferred by orthology to a human protein).
    
 
 0.971
NBR_LOCUS14810
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.941
NBR_LOCUS21257
Uncharacterized protein.
     
 0.935
NBR_LOCUS7512
DNTTIP1_dimer domain-containing protein.
     
 0.896
NBR_LOCUS16915
Exportin-5 (inferred by orthology to a human protein).
    
 
 0.858
NBR_LOCUS12072
Sm domain-containing protein.
    
 0.816
NBR_LOCUS12091
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.812
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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