STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS8868Sodium/potassium-transporting ATPase subunit alpha. (1019 aa)    
Predicted Functional Partners:
NBR_LOCUS10945
Uncharacterized protein.
   
 0.975
NBR_LOCUS406
Uncharacterized protein.
   
 0.781
NBR_LOCUS5362
Uncharacterized protein.
   
 0.751
NBR_LOCUS14950
Uncharacterized protein.
   
 0.751
NBR_LOCUS20131
Uncharacterized protein.
   
 0.751
NBR_LOCUS8855
Probable inorganic pyrophosphatase 1 (inferred by orthology to a C. elegans protein).
    
 0.677
NBR_LOCUS2253
TPK_catalytic domain-containing protein.
    
 0.674
NBR_LOCUS5745
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism. Adenylate kinase activity is critical for regulation of the phosphate utilization and the AMP de novo biosynthesis pathways.
  
 
 0.658
NBR_LOCUS11888
cGMP-dependent protein kinase egl-4 (inferred by orthology to a C. elegans protein).
    
 0.650
NBR_LOCUS8067
Probable adenylate kinase isoenzyme (inferred by orthology to a C. elegans protein).
  
 
 0.607
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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