STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS9157Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (429 aa)    
Predicted Functional Partners:
NBR_LOCUS20935
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.753
NBR_LOCUS3302
Neur_chan_LBD domain-containing protein.
  
 0.747
NBR_LOCUS1925
Neur_chan_LBD domain-containing protein.
   
 0.694
NBR_LOCUS2300
Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.694
NBR_LOCUS2554
Uncharacterized protein.
   
 0.694
NBR_LOCUS4350
Uncharacterized protein.
   
 0.694
NBR_LOCUS17448
Neur_chan_LBD domain-containing protein.
   
 0.694
NBR_LOCUS8187
Vesicle-fusing ATPase (inferred by orthology to a C. elegans protein).
     
 0.598
NBR_LOCUS19860
Neur_chan_memb domain-containing protein.
  
 
  0.597
NBR_LOCUS16262
Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
  0.593
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.