Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NBR_LOCUS10159 | NBR_LOCUS14264 | A0A0N4Y318 | A0A158R1Q5 | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | Uncharacterized protein. | 0.956 |
NBR_LOCUS10159 | NBR_LOCUS14917 | A0A0N4Y318 | A0A0N4YE25 | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | Probable ATP-dependent RNA helicase DDX56 (inferred by orthology to a human protein). | 0.855 |
NBR_LOCUS10159 | NBR_LOCUS15166 | A0A0N4Y318 | A0A158R273 | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.868 |
NBR_LOCUS10159 | NBR_LOCUS17096 | A0A0N4Y318 | A0A0N4YJF7 | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | 0.847 |
NBR_LOCUS10159 | NBR_LOCUS19194 | A0A0N4Y318 | A0A0N4YPM1 | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | Sas10 domain-containing protein. | 0.878 |
NBR_LOCUS10159 | NBR_LOCUS22114 | A0A0N4Y318 | A0A0N4YXZ1 | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | Ribosome biogenesis protein BOP1 homolog (inferred by orthology to a C. elegans protein). | 0.868 |
NBR_LOCUS10159 | NBR_LOCUS310 | A0A0N4Y318 | A0A0N4XCV6 | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | Probable RNA-binding protein 19 (inferred by orthology to a human protein). | 0.858 |
NBR_LOCUS10159 | NBR_LOCUS5645 | A0A0N4Y318 | A0A0N4XSY3 | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | WD_REPEATS_REGION domain-containing protein. | 0.844 |
NBR_LOCUS10159 | NBR_LOCUS6609 | A0A0N4Y318 | A0A0N4XV23 | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | Probable ATP-dependent RNA helicase DDX52 (inferred by orthology to a human protein). | 0.889 |
NBR_LOCUS10159 | NBR_LOCUS952 | A0A0N4Y318 | A0A0N4XEJ9 | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | Sas10 domain-containing protein. | 0.878 |
NBR_LOCUS14264 | NBR_LOCUS10159 | A0A158R1Q5 | A0A0N4Y318 | Uncharacterized protein. | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | 0.956 |
NBR_LOCUS14264 | NBR_LOCUS14917 | A0A158R1Q5 | A0A0N4YE25 | Uncharacterized protein. | Probable ATP-dependent RNA helicase DDX56 (inferred by orthology to a human protein). | 0.671 |
NBR_LOCUS14917 | NBR_LOCUS10159 | A0A0N4YE25 | A0A0N4Y318 | Probable ATP-dependent RNA helicase DDX56 (inferred by orthology to a human protein). | Putative ATP-dependent RNA helicase (inferred by orthology to a C. elegans protein). | 0.855 |
NBR_LOCUS14917 | NBR_LOCUS14264 | A0A0N4YE25 | A0A158R1Q5 | Probable ATP-dependent RNA helicase DDX56 (inferred by orthology to a human protein). | Uncharacterized protein. | 0.671 |
NBR_LOCUS14917 | NBR_LOCUS15166 | A0A0N4YE25 | A0A158R273 | Probable ATP-dependent RNA helicase DDX56 (inferred by orthology to a human protein). | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.967 |
NBR_LOCUS14917 | NBR_LOCUS17096 | A0A0N4YE25 | A0A0N4YJF7 | Probable ATP-dependent RNA helicase DDX56 (inferred by orthology to a human protein). | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | 0.998 |
NBR_LOCUS14917 | NBR_LOCUS19194 | A0A0N4YE25 | A0A0N4YPM1 | Probable ATP-dependent RNA helicase DDX56 (inferred by orthology to a human protein). | Sas10 domain-containing protein. | 0.895 |
NBR_LOCUS14917 | NBR_LOCUS22114 | A0A0N4YE25 | A0A0N4YXZ1 | Probable ATP-dependent RNA helicase DDX56 (inferred by orthology to a human protein). | Ribosome biogenesis protein BOP1 homolog (inferred by orthology to a C. elegans protein). | 0.967 |
NBR_LOCUS14917 | NBR_LOCUS310 | A0A0N4YE25 | A0A0N4XCV6 | Probable ATP-dependent RNA helicase DDX56 (inferred by orthology to a human protein). | Probable RNA-binding protein 19 (inferred by orthology to a human protein). | 0.996 |
NBR_LOCUS14917 | NBR_LOCUS5645 | A0A0N4YE25 | A0A0N4XSY3 | Probable ATP-dependent RNA helicase DDX56 (inferred by orthology to a human protein). | WD_REPEATS_REGION domain-containing protein. | 0.983 |
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