STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS11065DRMBL domain-containing protein. (697 aa)    
Predicted Functional Partners:
NBR_LOCUS19907
X-ray repair cross-complementing protein 5 (inferred by orthology to a human protein).
    
 0.985
NBR_LOCUS19955
X-ray repair cross-complementing protein 5 (inferred by orthology to a human protein).
    
 0.985
NBR_LOCUS18306
CPSF_A domain-containing protein.
   
 0.958
NBR_LOCUS7071
DNA ligase 4 (inferred by orthology to a human protein).
   
 0.950
NBR_LOCUS6411
WD_REPEATS_REGION domain-containing protein.
   
 0.918
NBR_LOCUS22656
Polycomb group RING finger protein 3 (inferred by orthology to a human protein).
    
 0.914
NBR_LOCUS7182
DNA ligase.
  
 0.895
NBR_LOCUS8717
E3 ubiquitin-protein ligase RBBP6 (inferred by orthology to a human protein).
    
 0.876
NBR_LOCUS196
Symplekin (inferred by orthology to a human protein).
   
 0.873
NBR_LOCUS5166
Symplekin (inferred by orthology to a human protein).
   
 0.873
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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