STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS11115Protein grainyhead (inferred by orthology to a D. melanogaster protein). (372 aa)    
Predicted Functional Partners:
NBR_LOCUS5924
Uncharacterized protein.
    
  0.607
NBR_LOCUS10885
TATA-box-binding protein (inferred by orthology to a C. elegans protein).
    
 0.601
NBR_LOCUS10113
Beclin 1-associated autophagy-related key regulator (inferred by orthology to a human protein).
    
 0.601
NBR_LOCUS548
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
     
 0.595
NBR_LOCUS18646
Uncharacterized protein.
 
      0.591
NBR_LOCUS15201
Histidine triad nucleotide-binding protein 1 (inferred by orthology to a C. elegans protein).
   
  0.590
NBR_LOCUS13404
TATA box-binding protein-like protein 1 (inferred by orthology to a human protein).
    
 0.584
NBR_LOCUS12663
Histidine triad nucleotide-binding protein 3 (inferred by orthology to a human protein).
   
  0.565
NBR_LOCUS18254
Histidine triad nucleotide-binding protein 3 (inferred by orthology to a human protein).
   
  0.565
NBR_LOCUS7095
Uncharacterized protein.
   
 0.555
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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