STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS11975Transcription factor unc-37 (inferred by orthology to a C. elegans protein). (657 aa)    
Predicted Functional Partners:
NBR_LOCUS6050
HMG box domain-containing protein.
    
 0.998
NBR_LOCUS13819
Homeobox protein engrailed-like ceh-16 (inferred by orthology to a C. elegans protein).
    
 
 0.953
NBR_LOCUS17668
Runt domain-containing protein.
    
 
 0.932
NBR_LOCUS19212
Uncharacterized protein.
    
 0.931
NBR_LOCUS7264
Ly-6-related protein ODR-2 (inferred by orthology to a C. elegans protein).
    
 0.931
NBR_LOCUS15561
BHLH domain-containing protein.
    
 0.931
NBR_LOCUS17
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.926
NBR_LOCUS6558
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.926
NBR_LOCUS20143
Uncharacterized protein.
    
 0.908
NBR_LOCUS2817
LAG1_DNAbind domain-containing protein.
    
 0.908
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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