STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS12173Nuclear anchorage protein 1 (inferred by orthology to a C. elegans protein). (1748 aa)    
Predicted Functional Partners:
NBR_LOCUS7897
Nuclear migration and anchoring protein unc-84 (inferred by orthology to a C. elegans protein).
    
 0.841
NBR_LOCUS19357
DH domain-containing protein.
    
 0.808
NBR_LOCUS10327
Spectrin-like nuclear envelope protein (inferred by orthology to a S. mansoni protein).
 
      0.775
NBR_LOCUS12375
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.754
NBR_LOCUS140
Integrin beta; Belongs to the integrin beta chain family.
    
 0.739
NBR_LOCUS6645
Uncharacterized integrin beta-like protein (inferred by orthology to a C. elegans protein).
    
 0.739
NBR_LOCUS8212
Spectrin alpha chain (inferred by orthology to a D. melanogaster protein).
    
 0.716
NBR_LOCUS9479
Transcription initiation factor TFIID subunit 12 (inferred by orthology to a human protein).
    
 0.704
NBR_LOCUS13891
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.691
NBR_LOCUS6456
Uncharacterized protein.
    
  0.677
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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