STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS12429Uncharacterized protein. (78 aa)    
Predicted Functional Partners:
NBR_LOCUS10388
Short coiled-coil protein (inferred by orthology to a human protein).
   
 
 0.907
NBR_LOCUS7708
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.693
NBR_LOCUS5960
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.510
NBR_LOCUS16752
Serine/threonine-protein kinase unc-51 (inferred by orthology to a C. elegans protein).
    
 
 0.510
NBR_LOCUS18063
GMP_PDE_delta domain-containing protein.
   
  
 0.502
NBR_LOCUS17389
Cell death protein 6 (inferred by orthology to a C. elegans protein).
      
 0.485
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.