STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS12447Alkylated DNA repair protein alkB homolog 1 (inferred by orthology to a human protein). (412 aa)    
Predicted Functional Partners:
NBR_LOCUS8427
Afadin (inferred by orthology to a human protein).
    
  0.707
NBR_LOCUS8426
Afadin (inferred by orthology to a human protein).
    
  0.707
NBR_LOCUS18443
Uncharacterized protein.
   
 
 0.592
NBR_LOCUS17071
Uncharacterized protein.
   
 
 0.584
NBR_LOCUS10517
Uncharacterized protein.
   
  
 0.579
NBR_LOCUS6117
Alkylated DNA repair protein alkB homolog 8 (inferred by orthology to a human protein).
   
  
 0.578
NBR_LOCUS16254
Uncharacterized protein.
   
  
 0.559
NBR_LOCUS14692
Uncharacterized protein.
   
  
 0.556
NBR_LOCUS6531
Uncharacterized protein.
      
 0.549
NBR_LOCUS10819
HemK methyltransferase family member 2 (inferred by orthology to a human protein).
   
  
 0.549
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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