STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS12654Prolyl 4-hydroxylase subunit alpha-2 (inferred by orthology to a C. elegans protein). (544 aa)    
Predicted Functional Partners:
NBR_LOCUS5958
Pyrroline-5-carboxylate reductase (inferred by orthology to a S. mansoni protein).
     
 0.930
NBR_LOCUS8346
Protein disulfide-isomerase.
   
 0.825
NBR_LOCUS6932
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
   
 
 0.816
NBR_LOCUS14846
Protein disulfide-isomerase.
   
 0.805
NBR_LOCUS11364
Protein disulfide-isomerase.
   
 0.799
NBR_LOCUS13124
Protein disulfide-isomerase (inferred by orthology to a S. mansoni protein).
   
 0.799
NBR_LOCUS7346
Uncharacterized protein.
    
 0.644
NBR_LOCUS14034
Uncharacterized protein.
    
 0.644
NBR_LOCUS5783
E3 ubiquitin-protein ligase RFWD2 (inferred by orthology to a human protein).
    
  0.642
NBR_LOCUS10359
Thioredoxin domain-containing protein.
   
 0.622
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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