STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS12880Putative tbp-1 interacting protein (inferred by orthology to a S. mansoni protein). (206 aa)    
Predicted Functional Partners:
NBR_LOCUS13702
Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.
   
 0.997
NBR_LOCUS14900
Meiotic recombination protein DMC1/LIM15 homolog (inferred by orthology to a human protein).
   
 0.704
NBR_LOCUS20762
Meiotic recombination protein DMC1/LIM15 homolog (inferred by orthology to a human protein).
   
 0.704
NBR_LOCUS9987
Meiotic recombination protein spo-11 (inferred by orthology to a C. elegans protein).
    
 
 0.696
NBR_LOCUS5316
DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein).
   
 0.587
NBR_LOCUS5332
RECA_2 domain-containing protein.
   
 0.587
NBR_LOCUS12517
DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein).
   
 0.587
NBR_LOCUS18965
DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein); Belongs to the RecA family.
   
 0.587
NBR_LOCUS20741
DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein).
   
 0.587
NBR_LOCUS15205
DNA repair protein RAD51 homolog 1 (inferred by orthology to a human protein); Belongs to the RecA family.
   
 0.587
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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