STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS13092MATH domain-containing protein. (175 aa)    
Predicted Functional Partners:
NBR_LOCUS19786
Inositol polyphosphate 5-phosphatase (inferred by orthology to a C. elegans protein).
 
    
 0.876
NBR_LOCUS5757
Cullin-6 (inferred by orthology to a C. elegans protein); Belongs to the cullin family.
   
 0.873
NBR_LOCUS8276
Cullin-3 (inferred by orthology to a C. elegans protein); Belongs to the cullin family.
   
 0.873
NBR_LOCUS19787
BTB domain-containing protein.
 
      0.873
NBR_LOCUS22255
Uncharacterized protein.
    
   0.845
NBR_LOCUS3423
RING-box protein 1 (inferred by orthology to a C. elegans protein).
    
 0.720
NBR_LOCUS17097
Ubiquitin-40S ribosomal protein S27a (inferred by orthology to a human protein).
    
 0.717
NBR_LOCUS13650
26S protease regulatory subunit 8 (inferred by orthology to a human protein); Belongs to the AAA ATPase family.
   
  0.712
NBR_LOCUS8365
Probable 26S protease regulatory subunit 4 (inferred by orthology to a C. elegans protein); Belongs to the AAA ATPase family.
   
  0.711
NBR_LOCUS18797
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.711
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.