STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS13253Diphthamide biosynthesis protein 7 (inferred by orthology to a human protein). (417 aa)    
Predicted Functional Partners:
NBR_LOCUS8592
Elongation factor 2 (inferred by orthology to a C. elegans protein).
   
 0.907
NBR_LOCUS2199
Tr-type G domain-containing protein.
   
 0.769
NBR_LOCUS2417
Uncharacterized protein.
   
 0.769
NBR_LOCUS5252
EFTUD2 domain-containing protein.
   
 0.769
NBR_LOCUS16830
Elongation factor G, mitochondrial (inferred by orthology to a C. elegans protein).
   
 0.761
NBR_LOCUS9941
Tr-type G domain-containing protein.
   
 0.761
NBR_LOCUS19217
EFG_C domain-containing protein.
   
 0.761
NBR_LOCUS15341
Diphthine--ammonia ligase; Amidase that catalyzes the last step of diphthamide biosynthesis using ammonium and ATP.
      
 0.549
NBR_LOCUS19386
Diphthine synthase (inferred by orthology to a human protein).
      
 0.549
NBR_LOCUS21507
DPH3 homolog (inferred by orthology to a C. elegans protein).
      
 0.549
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.