STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS13436Peptide methionine sulfoxide reductase (inferred by orthology to a D. melanogaster protein). (205 aa)    
Predicted Functional Partners:
NBR_LOCUS20138
Thioredoxin-1 (inferred by orthology to a C. elegans protein).
  
 0.989
NBR_LOCUS21418
Thioredoxin-1 (inferred by orthology to a C. elegans protein).
  
 0.989
NBR_LOCUS9440
Thioredoxin; Belongs to the thioredoxin family.
   
 0.983
NBR_LOCUS6287
Uncharacterized protein.
  
 0.982
NBR_LOCUS13977
Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.
 
 
 0.955
NBR_LOCUS17021
Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.
 
 
 0.955
NBR_LOCUS20486
DnaJ homolog subfamily C member 10 (inferred by orthology to a human protein).
   
 0.940
NBR_LOCUS2789
Endoplasmic reticulum resident protein 44 (inferred by orthology to a human protein).
   
 0.863
NBR_LOCUS5868
Probable protein disulfide-isomerase A6 (inferred by orthology to a C. elegans protein); Belongs to the protein disulfide isomerase family.
   
 0.863
NBR_LOCUS7346
Uncharacterized protein.
   
 0.863
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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