STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS13531Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
NBR_LOCUS12545
CWF19-like protein 1 homolog (inferred by orthology to a C. elegans protein).
   
  
 0.449
NBR_LOCUS46
SAP30_Sin3_bdg domain-containing protein.
      
 0.408
NBR_LOCUS14040
Citrate lyase subunit beta-like protein, mitochondrial (inferred by orthology to a human protein).
      
 0.408
NBR_LOCUS20691
28S ribosomal protein S33, mitochondrial (inferred by orthology to a human protein).
      
 0.408
NBR_LOCUS21442
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
      
 0.408
NBR_LOCUS14094
Uncharacterized protein.
      
 0.408
NBR_LOCUS13841
DUF1768 domain-containing protein.
      
 0.406
NBR_LOCUS192
CCHC-type domain-containing protein.
      
 0.402
NBR_LOCUS6055
UBA domain-containing protein.
      
 0.400
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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