STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS13714Uncharacterized protein. (524 aa)    
Predicted Functional Partners:
NBR_LOCUS12863
Uncharacterized protein.
   
 0.905
NBR_LOCUS12864
Uncharacterized protein.
   
 0.905
NBR_LOCUS12865
WW domain-containing protein.
   
 0.905
NBR_LOCUS21994
PDZ domain-containing protein.
   
 0.905
NBR_LOCUS12866
Guanylate kinase-like domain-containing protein.
   
 0.905
NBR_LOCUS6050
HMG box domain-containing protein.
    
 0.898
NBR_LOCUS13713
Uncharacterized protein.
 
      0.884
NBR_LOCUS16853
Uracil phosphoribosyltransferase homolog (inferred by orthology to a human protein).
  
 0.863
NBR_LOCUS5895
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.812
NBR_LOCUS11249
LD08669p (inferred by orthology to a D. melanogaster protein).
   
 0.801
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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