Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NBR_LOCUS10035 | NBR_LOCUS11975 | A0A0N4Y2R9 | A0A0N4Y764 | Rhombotin-2 (inferred by orthology to a human protein). | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | 0.453 |
NBR_LOCUS10035 | NBR_LOCUS13819 | A0A0N4Y2R9 | A0A0N4YBI0 | Rhombotin-2 (inferred by orthology to a human protein). | Homeobox protein engrailed-like ceh-16 (inferred by orthology to a C. elegans protein). | 0.755 |
NBR_LOCUS10035 | NBR_LOCUS5718 | A0A0N4Y2R9 | A0A0N4XT35 | Rhombotin-2 (inferred by orthology to a human protein). | LIM/homeobox protein ttx-3 (inferred by orthology to a C. elegans protein). | 0.908 |
NBR_LOCUS11975 | NBR_LOCUS10035 | A0A0N4Y764 | A0A0N4Y2R9 | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | Rhombotin-2 (inferred by orthology to a human protein). | 0.453 |
NBR_LOCUS11975 | NBR_LOCUS13819 | A0A0N4Y764 | A0A0N4YBI0 | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | Homeobox protein engrailed-like ceh-16 (inferred by orthology to a C. elegans protein). | 0.953 |
NBR_LOCUS11975 | NBR_LOCUS13950 | A0A0N4Y764 | A0A0N4YBT0 | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | Homeobox protein ceh-8 (inferred by orthology to a C. elegans protein). | 0.453 |
NBR_LOCUS11975 | NBR_LOCUS5718 | A0A0N4Y764 | A0A0N4XT35 | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | LIM/homeobox protein ttx-3 (inferred by orthology to a C. elegans protein). | 0.453 |
NBR_LOCUS11975 | NBR_LOCUS5869 | A0A0N4Y764 | A0A0N4XTE8 | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | LIM/homeobox protein Awh (inferred by orthology to a D. melanogaster protein). | 0.501 |
NBR_LOCUS11975 | NBR_LOCUS6147 | A0A0N4Y764 | A0A158QX26 | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | Uncharacterized protein. | 0.453 |
NBR_LOCUS11975 | NBR_LOCUS8485 | A0A0N4Y764 | A0A0N4XZ99 | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | Homeobox protein NOBOX (inferred by orthology to a human protein). | 0.703 |
NBR_LOCUS11975 | NBR_LOCUS9273 | A0A0N4Y764 | A0A0N4Y110 | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | CeLIM-7 (inferred by orthology to a C. elegans protein). | 0.453 |
NBR_LOCUS11975 | NBR_LOCUS9501 | A0A0N4Y764 | A0A0N4Y1J8 | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | Uncharacterized protein. | 0.453 |
NBR_LOCUS11975 | NBR_LOCUS9870 | A0A0N4Y764 | A0A0N4Y2D7 | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | Mechanosensory protein 3 (inferred by orthology to a C. elegans protein). | 0.453 |
NBR_LOCUS13819 | NBR_LOCUS10035 | A0A0N4YBI0 | A0A0N4Y2R9 | Homeobox protein engrailed-like ceh-16 (inferred by orthology to a C. elegans protein). | Rhombotin-2 (inferred by orthology to a human protein). | 0.755 |
NBR_LOCUS13819 | NBR_LOCUS11975 | A0A0N4YBI0 | A0A0N4Y764 | Homeobox protein engrailed-like ceh-16 (inferred by orthology to a C. elegans protein). | Transcription factor unc-37 (inferred by orthology to a C. elegans protein). | 0.953 |
NBR_LOCUS13819 | NBR_LOCUS13950 | A0A0N4YBI0 | A0A0N4YBT0 | Homeobox protein engrailed-like ceh-16 (inferred by orthology to a C. elegans protein). | Homeobox protein ceh-8 (inferred by orthology to a C. elegans protein). | 0.711 |
NBR_LOCUS13819 | NBR_LOCUS5718 | A0A0N4YBI0 | A0A0N4XT35 | Homeobox protein engrailed-like ceh-16 (inferred by orthology to a C. elegans protein). | LIM/homeobox protein ttx-3 (inferred by orthology to a C. elegans protein). | 0.779 |
NBR_LOCUS13819 | NBR_LOCUS5869 | A0A0N4YBI0 | A0A0N4XTE8 | Homeobox protein engrailed-like ceh-16 (inferred by orthology to a C. elegans protein). | LIM/homeobox protein Awh (inferred by orthology to a D. melanogaster protein). | 0.711 |
NBR_LOCUS13819 | NBR_LOCUS6147 | A0A0N4YBI0 | A0A158QX26 | Homeobox protein engrailed-like ceh-16 (inferred by orthology to a C. elegans protein). | Uncharacterized protein. | 0.768 |
NBR_LOCUS13819 | NBR_LOCUS8485 | A0A0N4YBI0 | A0A0N4XZ99 | Homeobox protein engrailed-like ceh-16 (inferred by orthology to a C. elegans protein). | Homeobox protein NOBOX (inferred by orthology to a human protein). | 0.711 |
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