STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS14336Pkinase_Tyr domain-containing protein. (84 aa)    
Predicted Functional Partners:
NBR_LOCUS16085
Sex muscle abnormal protein 5 (inferred by orthology to a C. elegans protein).
   
 0.746
NBR_LOCUS7807
Uncharacterized protein.
    
 0.737
NBR_LOCUS7808
Teneurin-1 (inferred by orthology to a C. elegans protein).
    
 0.737
NBR_LOCUS14360
Phosphatidylinositol 3-kinase age-1 (inferred by orthology to a C. elegans protein); Belongs to the PI3/PI4-kinase family.
    
 0.736
NBR_LOCUS17280
Anosmin-1 (inferred by orthology to a human protein).
    
 0.736
NBR_LOCUS10051
Uncharacterized protein.
    
 0.735
NBR_LOCUS5242
Uncharacterized protein.
    
 0.732
NBR_LOCUS13616
Uncharacterized protein; Belongs to the heparin-binding growth factors family.
    
 0.732
NBR_LOCUS6638
EGL-17 (inferred by orthology to a C. elegans protein); Belongs to the heparin-binding growth factors family.
    
 0.732
NBR_LOCUS8678
Uncharacterized protein.
    
 0.718
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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