STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS16030Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)    
Predicted Functional Partners:
NBR_LOCUS43
40S ribosomal protein S28 (inferred by orthology to a C. elegans protein).
   
 
 0.999
NBR_LOCUS338
Ubiquitin-60S ribosomal protein L40 (inferred by orthology to a C. elegans protein).
   
 0.999
NBR_LOCUS502
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 
 0.999
NBR_LOCUS548
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 
 0.999
NBR_LOCUS589
KOW domain-containing protein.
   
 0.999
NBR_LOCUS613
60S ribosomal protein L11 (inferred by orthology to a human protein); Belongs to the universal ribosomal protein uL5 family.
   
 0.999
NBR_LOCUS960
40S ribosomal protein S18 (inferred by orthology to a human protein).
   
 
 0.999
NBR_LOCUS1194
60S ribosomal protein L12 (inferred by orthology to a C. elegans protein); Belongs to the universal ribosomal protein uL11 family.
   
 0.999
NBR_LOCUS1748
40S ribosomal protein S14 (inferred by orthology to a C. elegans protein); Belongs to the universal ribosomal protein uS11 family.
   
 0.999
NBR_LOCUS3541
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.999
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.