STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS16082Uncharacterized protein. (242 aa)    
Predicted Functional Partners:
NBR_LOCUS21257
Uncharacterized protein.
   
 0.999
NBR_LOCUS14810
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.991
NBR_LOCUS12224
Nuclear pore complex protein Nup155 (inferred by orthology to a human protein).
   
 0.975
NBR_LOCUS9750
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.965
NBR_LOCUS9376
Nuclear pore complex protein 15 (inferred by orthology to a C. elegans protein).
   
 0.964
NBR_LOCUS6223
Exportin-1 (inferred by orthology to a human protein).
   
 
 0.963
NBR_LOCUS7642
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.961
NBR_LOCUS20036
Ran GTPase-activating protein 1 (inferred by orthology to a human protein).
   
 0.948
NBR_LOCUS22239
Uncharacterized protein.
   
 0.948
NBR_LOCUS22592
Ran GTPase-activating protein 1 (inferred by orthology to a human protein).
   
 0.948
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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