STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS16835Ubiquitin-like modifier-activating enzyme 5 (inferred by orthology to a C. elegans protein). (177 aa)    
Predicted Functional Partners:
NBR_LOCUS17846
Ubiquitin-fold modifier-conjugating enzyme 1 (inferred by orthology to a C. elegans protein).
  
 
 
 0.978
NBR_LOCUS7704
Ubiquitin-fold modifier 1; Ubiquitin-like modifier.
    
 
 0.972
NBR_LOCUS16260
Uncharacterized protein.
   
 0.965
NBR_LOCUS5189
Uncharacterized protein.
  
 0.954
NBR_LOCUS14596
Uncharacterized protein.
  
 0.954
NBR_LOCUS19395
Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.
  
 0.954
NBR_LOCUS15602
NEDD8-conjugating enzyme ubc-12 (inferred by orthology to a C. elegans protein); Belongs to the ubiquitin-conjugating enzyme family.
    
 0.945
NBR_LOCUS338
Ubiquitin-60S ribosomal protein L40 (inferred by orthology to a C. elegans protein).
    
 0.912
NBR_LOCUS18797
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.853
NBR_LOCUS81
Uncharacterized protein.
    
 0.852
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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