STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS16836rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (312 aa)    
Predicted Functional Partners:
NBR_LOCUS6504
DNA-directed RNA polymerase, mitochondrial (inferred by orthology to a human protein).
   
 0.992
NBR_LOCUS14119
U3 small nucleolar ribonucleoprotein protein IMP4 (inferred by orthology to a human protein).
   
   0.983
NBR_LOCUS10852
Cell adhesion protein byn-1 (inferred by orthology to a C. elegans protein).
   
 
 0.981
NBR_LOCUS17684
Cell adhesion protein byn-1 (inferred by orthology to a C. elegans protein).
   
 
 0.981
NBR_LOCUS11848
WD_REPEATS_REGION domain-containing protein.
   
   0.980
NBR_LOCUS13473
Protein LTV1 homolog (inferred by orthology to a C. elegans protein).
   
   0.976
NBR_LOCUS10112
Nucleolar complex protein 4 homolog (inferred by orthology to a human protein).
   
   0.969
NBR_LOCUS9782
Probable 40S ribosomal protein S9, mitochondrial (inferred by orthology to a C. elegans protein).
   
 
 0.967
NBR_LOCUS14274
Ribosomal RNA small subunit methyltransferase nep-1 (inferred by orthology to a C. elegans protein).
   
 
 0.967
NBR_LOCUS9480
40S ribosomal protein S3 (inferred by orthology to a C. elegans protein); Belongs to the universal ribosomal protein uS3 family.
  
 
 0.965
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.