STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS169114_1_CTD domain-containing protein. (267 aa)    
Predicted Functional Partners:
NBR_LOCUS10126
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.934
NBR_LOCUS8212
Spectrin alpha chain (inferred by orthology to a D. melanogaster protein).
   
 0.685
NBR_LOCUS13685
MAGUK p55 subfamily member 5 (inferred by orthology to a human protein); Belongs to the MAGUK family.
    
 0.672
NBR_LOCUS14399
PDZ domain-containing protein.
    
 0.672
NBR_LOCUS16210
PDZ domain-containing protein.
    
 0.672
NBR_LOCUS1753
Uncharacterized protein.
    
 0.672
NBR_LOCUS15359
Calcium/calmodulin-dependent protein kinase type II (inferred by orthology to a C. elegans protein).
   
 0.653
NBR_LOCUS16631
Protein kinase (inferred by orthology to a S. mansoni protein).
   
 0.653
NBR_LOCUS14004
CaMKII_AD domain-containing protein.
   
 0.653
NBR_LOCUS833
FERM domain-containing protein.
 
   
 0.638
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.