STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS16985Col_cuticle_N domain-containing protein. (259 aa)    
Predicted Functional Partners:
NBR_LOCUS906
Obscurin-like protein 1 (inferred by orthology to a human protein).
    
 0.697
NBR_LOCUS955
Uncharacterized protein.
    
 0.697
NBR_LOCUS1516
Uncharacterized protein.
    
 0.697
NBR_LOCUS2553
Hemicentin-1 (inferred by orthology to a human protein).
    
 0.697
NBR_LOCUS3188
Uncharacterized protein.
    
 0.697
NBR_LOCUS3352
Ig-like domain-containing protein.
    
 0.697
NBR_LOCUS3473
Ig-like domain-containing protein.
    
 0.697
NBR_LOCUS4526
Ig-like domain-containing protein.
    
 0.697
NBR_LOCUS4716
I-set domain-containing protein.
    
 0.697
NBR_LOCUS4815
Ig-like domain-containing protein.
    
 0.697
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.