STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS17062Amidase domain-containing protein. (220 aa)    
Predicted Functional Partners:
NBR_LOCUS9807
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
  
 0.990
NBR_LOCUS15666
Aspartate--tRNA ligase, mitochondrial (inferred by orthology to a human protein).
  
 0.916
NBR_LOCUS9689
CAD protein (inferred by orthology to a human protein).
   
 
 0.829
NBR_LOCUS7737
Putative l-asparaginase I (inferred by orthology to a S. mansoni protein).
    
 0.807
NBR_LOCUS7968
Probable GMP synthase [glutamine-hydrolyzing] (inferred by orthology to a C. elegans protein).
  
 
 0.802
NBR_LOCUS5701
Acetyl-CoA carboxylase (inferred by orthology to a S. mansoni protein).
  
 
 0.790
NBR_LOCUS3059
Glutamine--tRNA ligase (inferred by orthology to a human protein).
  
 0.763
NBR_LOCUS3708
Putative glutamyl-tRNA synthetase, cytoplasmic (inferred by orthology to a S. mansoni protein); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.763
NBR_LOCUS6118
Probable glutamate--tRNA ligase, mitochondrial (inferred by orthology to a human protein); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.763
NBR_LOCUS13645
Bifunctional glutamate/proline--tRNA ligase (inferred by orthology to a D. melanogaster protein); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.763
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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