STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS17295C2H2-type domain-containing protein. (723 aa)    
Predicted Functional Partners:
NBR_LOCUS20173
Lysine-specific demethylase 8 (inferred by orthology to a human protein).
    
 
 0.874
NBR_LOCUS14910
Ras-related protein Rab-17 (inferred by orthology to a human protein).
    
 0.792
NBR_LOCUS11113
HECT domain-containing protein.
    
 0.784
NBR_LOCUS1276
Properdin (inferred by orthology to a human protein).
    
 0.763
NBR_LOCUS13295
Uncharacterized protein.
    
 0.763
NBR_LOCUS14810
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.763
NBR_LOCUS19202
Properdin (inferred by orthology to a human protein).
    
 0.763
NBR_LOCUS5725
Molting protein MLT-1 (inferred by orthology to a C. elegans protein).
    
 0.753
NBR_LOCUS11136
Uncharacterized protein.
   
 0.730
NBR_LOCUS20143
Uncharacterized protein.
   
 0.714
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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