STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS17510Uncharacterized protein. (460 aa)    
Predicted Functional Partners:
NBR_LOCUS5701
Acetyl-CoA carboxylase (inferred by orthology to a S. mansoni protein).
   
 0.679
NBR_LOCUS13858
Huntingtin interacting protein 1 (inferred by orthology to a D. melanogaster protein).
    
 0.658
NBR_LOCUS1330
IRK domain-containing protein.
    
 0.627
NBR_LOCUS6635
Inward rectifier potassium channel irk-1 (inferred by orthology to a C. elegans protein).
    
 0.627
NBR_LOCUS6636
Uncharacterized protein.
    
 0.627
NBR_LOCUS14313
IRK_C domain-containing protein.
    
 0.627
NBR_LOCUS7136
Uncharacterized protein.
   
 0.580
NBR_LOCUS13073
Uncharacterized protein.
  
 
0.578
NBR_LOCUS6701
TAFH domain-containing protein.
    
 0.561
NBR_LOCUS16727
Uncharacterized protein.
   
 0.559
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.