STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS17995Chaperonin homolog Hsp-60, mitochondrial (inferred by orthology to a C. elegans protein); Belongs to the chaperonin (HSP60) family. (479 aa)    
Predicted Functional Partners:
NBR_LOCUS21049
10 kDa heat shock protein, mitochondrial (inferred by orthology to a human protein); Belongs to the GroES chaperonin family.
 
 
 0.992
NBR_LOCUS20882
10 kDa heat shock protein, mitochondrial (inferred by orthology to a human protein); Belongs to the GroES chaperonin family.
 
 
 0.991
NBR_LOCUS21050
Uncharacterized protein; Belongs to the TCP-1 chaperonin family.
 
     0.951
NBR_LOCUS12746
GrpE protein homolog, mitochondrial (inferred by orthology to a C. elegans protein); Belongs to the GrpE family.
  
 0.939
NBR_LOCUS2880
Uncharacterized protein.
  
 0.901
NBR_LOCUS5487
Heat shock 70 kDa protein F, mitochondrial (inferred by orthology to a C. elegans protein).
  
 0.901
NBR_LOCUS16616
Heat shock 70 kDa protein F, mitochondrial (inferred by orthology to a C. elegans protein).
  
 0.901
NBR_LOCUS16617
Heat shock 70 kDa protein F, mitochondrial (inferred by orthology to a C. elegans protein).
  
 0.901
NBR_LOCUS12382
T-complex protein 1 subunit alpha (inferred by orthology to a C. elegans protein).
   
 
 0.889
NBR_LOCUS20382
T-complex protein 1 subunit theta (inferred by orthology to a C. elegans protein).
   
 0.859
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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