STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS18075PHD finger protein 10 (inferred by orthology to a human protein). (101 aa)    
Predicted Functional Partners:
NBR_LOCUS19219
Uncharacterized protein.
    
 0.996
NBR_LOCUS8178
Protein polybromo-1 (inferred by orthology to a human protein).
    
 0.994
NBR_LOCUS11175
HMG box domain-containing protein.
   
 0.994
NBR_LOCUS15888
SWI/SNF nucleosome remodeling complex component (inferred by orthology to a C. elegans protein).
    
 0.994
NBR_LOCUS16818
Uncharacterized protein.
    
 0.994
NBR_LOCUS16308
Uncharacterized protein; Belongs to the actin family.
    
 0.993
NBR_LOCUS17751
Brahma-associated protein of 60 kDa (inferred by orthology to a D. melanogaster protein).
    
 0.988
NBR_LOCUS5384
Uncharacterized protein.
    
 0.988
NBR_LOCUS3612
Uncharacterized protein.
    
 0.969
NBR_LOCUS14493
Uncharacterized protein.
    
 0.969
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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